BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C01SP1|AL428509
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1669 1624 0.0
>3x_Contig1669
Length = 15503
Score = 1624 bits (800), Expect = 0.0
Identities = 855/895 (95%)
Strand = Plus / Minus
Query: 1 acaataacgatcgccttccctcttttgctagcaataatttaggttcgcacagtttttatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6169 acaataacgatcgccttccctcttttgctagcaataatttaggttcgcacagtttttatc 6110
Query: 61 aatagaaataatcccggrtgtcacaatttaagagaaacgccagttcgaagaaactggact 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6109 aatagaaataatcccggatgtcacaatttaagagaaacgccagttcgaagaaactggact 6050
Query: 121 ctgagactaaatwtwagcttgwgacgctatyagaattgttcccagattggrcaaatgatg 180
|||||||||||| | |||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct: 6049 ctgagactaaatataagcttgagacgctatcagaattgttcccagattggacaaatgatg 5990
Query: 181 atttaattgatttagtccgtgaatatgatgatctagaaaccatagttgataagataacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5989 atttaattgatttagtccgtgaatatgatgatctagaaaccatagttgataagataacta 5930
Query: 241 ctggrgcagtgacaaaatggggcgaagtgaagaaaccatctaaaaaggraaagcctgcat 300
|||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 5929 ctggagcagtgacaaaatgggacgaagtgaagaaaccatctaaaaaggaaaagcctgcat 5870
Query: 301 cgcatatagaacaccaatctcatagttctcatcaacagctgcaacaacaagccgcatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5869 cgcatatagaacaccaatctcatagttctcatcaacagctgcaacaacaagccgcatcac 5810
Query: 361 acctgggccctgaagattctccttctctaataaatcaacatcattcgcatcaaagacaat 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5809 acctggaccctgaagattctccttctctaataaatcaacatcattcgcatcaaagacaat 5750
Query: 421 ctagrtccacctctragttcagtgataacagcgccaatggcgaatcagtgcracaragac 480
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||| ||| ||||
Sbjct: 5749 ctagatccacctctaagttcagtaataacagcgccaatggcaaatcagtgcaacaaagac 5690
Query: 481 agcgacaccagtcaaatwatwaagrtaacaagaagcagccttcaaaggrtagtttgaagc 540
||| ||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 5689 agcaacaccagtcaaataataaagataacaagaagcagccttcaaaggatagtttgaagc 5630
Query: 541 ctgctccattaccatctaaatctwacgctggkaataacgcggggkcttkggccgccgtat 600
||||||||||||||||||||||| ||||||| |||||||||||| ||| |||||||||||
Sbjct: 5629 ctgctccattaccatctaaatctaacgctggtaataacgcggggtcttgggccgccgtat 5570
Query: 601 tkgcagaaaaraaaaargctcatgaaaaraarattgaccatacaaagtcgtctaatacaa 660
| |||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 5569 tggcagaaaagaaaaaggctcatgaaaagaagattgaccatacaaagtcgtctaatacaa 5510
Query: 661 ttgcmcatgaatctwctaatgaacaatctgaatctaatgaacataccgaaccaactgaag 720
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5509 ttgcacatgaatctactaatgaacaatctgaatctaatgaacataccgaaccaactgaag 5450
Query: 721 ttgaagttgcacctgcccagcctgttgactctgcaccagaatctgtsagccatcaacatg 780
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5449 ttgaagttgcacctgcccagcctgttgactctgcaccagaatctgtcagccatcaacatg 5390
Query: 781 cgccagaatctgaatcaatcgccmccmcaaacggkggttctnagccaaagagttgggstg 840
||||||||||||||||||||||| || ||||||| | |||| ||||||||||||||| ||
Sbjct: 5389 cgccagaatctgaatcaatcgccaccacaaacggtgattctaagccaaagagttgggctg 5330
Query: 841 acattgcaagcgcaaagagcagacaaagacaacttcagcaacagaacaagaagca 895
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5329 acattgcaagcgcaaagagcagacaaagacaactacagcaacagaacaagaagca 5275
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4756
Number of Sequences: 1807
Number of extensions: 4756
Number of successful extensions: 104
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (100.0 bits)